Timeline
23/05/12: Today
- 14:04 Changeset [14414] by
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Changed "ALTER TABLE ONLY " to "ALTER TABLE " because I don't think it ...
- 14:03 Changeset [14413] by
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Adding domain_ssap_result to the list of tables on which select access ...
- 13:52 Changeset [14412] by
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corrected location of /static
- 13:50 Changeset [14411] by
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corrected quotes
- 13:44 Changeset [14410] by
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update of this config
- 13:43 Changeset [14409] by
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attempt to sort issues when parsing /etc/exports with augeas
- 13:42 Changeset [14408] by
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require php53
- 13:41 Changeset [14407] by
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added genome3dserver
- 13:41 Changeset [14406] by
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added some role to fletcher, bsmlx53 and genome3d
- 13:40 Changeset [14405] by
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modifies exports for orengosvn
- 13:39 Changeset [14404] by
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added some more files
- 13:39 Changeset [14403] by
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added some files
- 13:38 Changeset [14402] by
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upgraded to postgres-9.0
- 13:37 Changeset [14401] by
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added gd
- 13:35 Changeset [14400] by
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upgraded to postgres90 and gcc44
- 13:27 Changeset [14399] by
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trying to sort out quotes
- 13:23 Changeset [14398] by
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comment out the /usr/local/svn automount rather than remove the file
- 13:16 Changeset [14397] by
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Removing a foreign key dependency that can no longer be met by the data ...
- 13:15 Changeset [14396] by
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Adding files that can be used to import the necessary data from our Oracle ...
- 12:59 Changeset [14395] by
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Added a domain_ssap_result table to the biomap SQL.
- 12:57 Changeset [14394] by
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Moved the uniprot.taxon_id -> taxon_node.taxon_id relationship below the ...
- 12:30 Changeset [14393] by
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corrected the static link to the build dir not the source dir
- 11:38 Changeset [14392] by
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Simple script to rename all files in a given directory.
- 11:25 Changeset [14391] by
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fixed typo
- 11:21 Changeset [14390] by
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remove the reference to auto.usr.local from auto.master
22/05/12: Yesterday
- 19:07 Changeset [14389] by
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take into account the fact that seqres_length has been removed from Biomap ...
- 17:20 Changeset [14388] by
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Removing some dead wood.
- 11:21 Changeset [14387] by
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Merged changeset:14386 from the trunk into the v5.0 branch.
- 11:20 Changeset [14386] by
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Added the Wolfson House subnet to the IP address patterns treated as ...
- 11:15 Changeset [14385] by
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Reverting changeset:14103 with the hope that we can now handle the strain ...
21/05/12:
- 11:37 Changeset [14384] by
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Further development on the database SQL. I should try to commit more ...
18/05/12:
- 18:05 Changeset [14383] by
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Script to get all the latest sequences from the database resource, given ...
- 18:04 Changeset [14382] by
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Working version.
- 18:04 Changeset [14381] by
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Script to count the abundance of each Pfam assignment from PfamScan? ...
- 12:15 Changeset [14380] by
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Hesitantly restarting all the CATH update scripts (following on from ...
17/05/12:
- 17:14 Changeset [14379] by
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NEW - # 738: Reformat the sequence headers in the CATH alignments ...
- 15:38 Changeset [14378] by
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Some changes that I made with Ian's help. I'm sure it does something ...
- 14:27 Changeset [14377] by
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Added data needed for sequence alignment tests
- 14:25 Changeset [14376] by
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NEW - # 738: Reformat the sequence headers in the CATH alignments ...
- 14:10 Changeset [14375] by
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adding this dir in preparation for CentOS6
- 12:15 Changeset [14374] by
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exporting LD_LIBRARY_PATH
- 11:53 Changeset [14373] by
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added LD_LIBRARY_PATH to sysconfig
16/05/12:
- 14:22 Changeset [14372] by
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Updating the schema with some recent changes to our biomap ...
11/05/12:
- 16:40 Changeset [14371] by
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added ability to specify the same input dir and output dir as long as you ...
- 14:13 Changeset [14370] by
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Removing this pdbmirror directory because I don't believe it is used any ...
- 14:06 Changeset [14369] by
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The previous changeset (changeset:14368) was a really stupid erroneous ...
- 13:58 Changeset [14368] by
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Removing this pdbmirror directory because I don't believe it is used any ...
- 13:52 Changeset [14367] by
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Adding a new mirror package for mirroring the SIFTS XML files from the ...
- 13:32 Changeset [14366] by
- 13:32 Changeset [14365] by
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corrected the way summary hits are converted to a list (it's a hack, but ...
- 12:43 Changeset [14364] by
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brought up to speed with trunk
- 12:41 Changeset [14363] by
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brought this script up to speed with trunk
10/05/12:
- 20:05 Changeset [14362] by
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#743 - allowing more than one blast result (provides a summary of the top ...
- 18:38 Changeset [14361] by
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adding sequence header processing utilities
- 18:36 Changeset [14360] by
09/05/12:
- 17:24 Changeset [14359] by
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Tidied up the page and site nav bar (Bootstrap)
- 17:12 Changeset [14358] by
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improvements to startup script (runs tests)
- 16:48 Changeset [14357] by
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removed PageCache? as it is doing weird things on server
- 15:00 Changeset [14356] by
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removed random text :P
- 14:59 Changeset [14355] by
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Corrected parsing SCOP family -> superfamily Created TT MACRO:
[% ...
- 13:22 Changeset [14354] by
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Moved layout over to Bootstrap (including DataTables? integration) Tidied ...
08/05/12:
- 14:08 Changeset [14353] by
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Adding the minutes document for the 25th April meeting at the EBI.
02/05/12:
- 18:41 Changeset [14352] by
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corrected tests and fixed the hack getting funfam rep scorecons from ...
- 17:38 Changeset [14351] by
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flipped the biomap databases over again
- 17:12 Changeset [14350] by
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Added a moniker map to prevent dbicdump erroneously singularising ...
- 17:09 Changeset [14349] by
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Committing changes to the schema arising from changes to the database ...
- 17:01 Changeset [14348] by
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highlighting the scorecons colouring on the funfam rep structure (all ...
- 15:55 Changeset [14347] by
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Adding slides for the most recent meeting.
- 11:40 Changeset [14346] by
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New control files and updates.
- 11:39 Changeset [14345] by
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New scripts for generating funfam scorecons, other funfam scripts.
- 11:38 Changeset [14344] by
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Backing up current funfam layout.
01/05/12:
- 22:13 Changeset [14343] by
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disabled the Biojs.console
- 22:03 Changeset [14342] by
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added ability to load and colour alignments by scorecons
- 19:22 Changeset [14341] by
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added a couple of Types to keep Cath-WWW happy
- 18:57 Changeset [14340] by
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corrections to tests and types
- 17:57 Changeset [14339] by
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Script to output all funfam IDs from given directory or rep files OR all ...
- 16:38 Changeset [14338] by
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changed nearly all the Moose Types defined in Cath::Types to be unquoted ...
- 16:36 Changeset [14337] by
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First commit. Script to map funfam id to ec. Not sure if it is in perfect ...
- 16:18 Changeset [14336] by
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Made the irrelevant domains grey and all other domains green as the ...
- 16:17 Changeset [14335] by
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With Ian's help, moved the configuration of the caching into the conf ...
- 15:48 Changeset [14334] by
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Updating schema to reflect recent changes to the biomap database.
30/04/12:
- 17:32 Changeset [14333] by
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Added new data quality filter on the SQL query to ensure that all of the ...
26/04/12:
- 17:50 Changeset [14332] by
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Script to count the number of sequences assigned to a funfam with the ...
- 15:46 Changeset [14331] by
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Minor changes to send output to file.
- 15:46 Changeset [14330] by
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Extracts IBIS-annotated residues for a given EC and representative ...
- 13:21 Changeset [14329] by
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corrected Cath.Version types
- 13:19 Changeset [14328] by
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changed type 'Cath.Version' to CathVersion?
- 11:56 Changeset [14327] by
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Some notes on restarting Catalyst or wiping its cache.
25/04/12:
- 18:17 Changeset [14326] by
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Script to takes output from extract_scorecons_for_sequence.pl and prints ...
- 09:31 Changeset [14325] by
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bob
- 09:30 Changeset [14324] by
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bob
- 09:25 Changeset [14323] by
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kuyg
- 09:14 Changeset [14322] by
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updated text
- 09:12 Changeset [14321] by
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removed duplicated nav links
- 09:07 Changeset [14320] by
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Slight changes to the links.
- 09:01 Changeset [14319] by
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more config
- 08:59 Changeset [14318] by
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Removing some verbose comments that gets sent several thousand times at ...
- 08:54 Changeset [14317] by
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more config
- 08:51 Changeset [14316] by
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sorted PageCache?
- 08:47 Changeset [14315] by
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fiddling with PAgeCache config
- 08:43 Changeset [14314] by
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changes to conf and startup script
- 01:18 Changeset [14313] by
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foolishly adding caching changed to the server the night before a big ...
24/04/12:
- 21:56 Changeset [14312] by
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more commits
- 21:09 Changeset [14311] by
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Work to get a basic page showing a summary of the quantities of data in ...
- 20:33 Changeset [14310] by
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Removed a superfluous dump of data.
- 19:56 Changeset [14309] by
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first commit
- 19:53 Changeset [14308] by
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updates
- 19:46 Changeset [14307] by
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Committing a bunch of changes to make some nicer CATH/SCOP mapping pages.
- 19:15 Changeset [14306] by
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A bunch of changes to do with loading more annotation/models.
- 19:13 Changeset [14305] by
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A bit of playing around with this browse page. Committing now so that we ...
- 16:49 Changeset [14304] by
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Working version.
- 16:49 Changeset [14303] by
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Working version.
- 16:02 Changeset [14302] by
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Tweaking the navbar's links.
- 15:58 Changeset [14301] by
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fixed errors
- 15:32 Changeset [14300] by
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updated cath/scop
- 15:31 Changeset [14299] by
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load of changes - adding some colour management stuff, ability to deal ...
23/04/12:
- 11:39 Changeset [14298] by
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added browse pages and logging stuff
